> PLPR0419 ..AC:U83619.1 ..OS:Arabidopsis thaliana ..GENE:At59 ..PROD:putative pectate lyase At59 ..[ -200:  +51]  ..CDS: +111 ..TSS:201 (+1) # Alternative TSS(s): +9 |Taxon: Dicot |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.31   G -  0.15   T -  0.33   C -  0.21

      1  taactgaaaa tatccagaaa agaaggatta aacaaaggca tccaaaatct
     51  ataattgggt tttttggaga aatgaccata gagatttaaa tcaatggttg
    101  tctaatctat gttaattcTC AATcctctat tgactcttct catctccttt
    151  tctctctccc cagttcctgg ttattaaagc aatcaggtga ttcaaatctt
    201  TAATCTTTTA ATCCCGGCAG GCCTATCTGA AACAACAACC TCCGTTTGAG
    251  G

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00163   Mean Expected Number 0.003   +strand    -55 :  -45   CCTTTTcTCTC
AC RSP00285   Mean Expected Number 0.000   -strand   -132 : -144   CTCCAAaAAACCC
AC RSP00467   Mean Expected Number 0.003   -strand   -123 : -132   TGGTCATTTC
AC RSP00653   Mean Expected Number 0.004   +strand    -51 :  -41   TTCTCTCTCCc
AC RSP00865   Mean Expected Number 0.001   -strand    -42 :  -50   GGAGAGAGA
AC RSP01602   Mean Expected Number 0.008   +strand    -84 :  -77   TCTCAATC

  Totally       6 motifs of     6 different REs have been found


Description of REs found

  158. Group TF: ARF1 /AC: RSP00163//OS: Glycine max /GENE: Synthetic OLIGO/RE: DR5 /TF: ARF1
  276. Group RE: Box P /AC: RSP00285//OS: Petroselinum crispum /GENE: PAL-1/RE: Box P /TF: unknown
  445. Group RE: ERE1 /AC: RSP00467//OS: Dianthus caryophyylus /GENE: hcbt2/RE: ERE1 /TF: unknown
  627. Group RE: CT-LB /AC: RSP00653//OS: Spinacia oleracea /GENE: petH/RE: CT-LB /TF: unknown
  801. Group TF: BPC1 /AC: RSP00865//OS: Arabidopsis thaliana /GENE: STK/RE: GA-6 /TF: BPC1
 1423. Group RE: Inr /AC: RSP01602//OS: Spinacia oleracea /GENE: PsaDb/RE: Inr /TF: unknown