> PLPR0424 ..AC:U49977.1 ..OS:Pisum sativum ..GENE:SBP65 ..PROD:seed biotinylated protein ..[ -200:  +51]  ..CDS: +118 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.37   G -  0.08   T -  0.27   C -  0.29

      1  ctttaaacat gaaaaatcta gcgtcgataa cgatccaatc attgtaattt
     51  ccatttcact acgctgagtc acacaatatc atcacacgtg tgagtaataa
    101  gcacacatgt cctctcccat GCAATaacct ttcatcacca acctcttcaa
    151  accgccaatc ccatttccct tttaaatcaa acattctcat tctcataacc
    201  ATCACAAACA CAAGTTCAAA CATCTTTAAA AACATCAAAA CAAAAACCGT
    251  A

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00190   Mean Expected Number 0.004   +strand   -136 : -130   TGAGTCA
AC RSP00524   Mean Expected Number 0.004   +strand   -117 : -111   ACACGTG
AC RSP00524   Mean Expected Number 0.003   -strand   -110 : -116   ACACGTG
AC RSP00745   Mean Expected Number 0.005   -strand    -68 :  -79   GAAAGGTTATTg
AC RSP01256   Mean Expected Number 0.001   +strand   -117 : -110   ACACGTGT
AC RSP01256   Mean Expected Number 0.001   -strand   -110 : -117   ACACGTGT
AC RSP01469   Mean Expected Number 0.004   +strand   -119 : -110   TCACAcGTGT
AC RSP01469   Mean Expected Number 0.007   -strand   -108 : -117   TCACAcGTGT
AC RSP01727   Mean Expected Number 0.000   +strand   -119 : -108   TCACACGTGTGA
AC RSP01727   Mean Expected Number 0.000   -strand   -108 : -119   TCACACGTGTGA

  Totally      10 motifs of     6 different REs have been found


Description of REs found

  184. Group RE: GCN4 box /AC: RSP00190//OS: Oryza sativa /GENE: GluB-1/RE: GCN4 box /TF: unknown ||Identical REs AC:  RSP00666  RSP00959
  500. Group TF: DPBF-1; DPBF-2 /AC: RSP00524//OS: Daucus carota /GENE: Dc3/RE: E4-core /TF: DPBF-1; DPBF-2
  707. Group TF: GT-1 /AC: RSP00745//OS: Nicotiana plumbaginifolia /GENE: Cab-E/RE: box 5 /TF: GT-1
 1159. Group TF: GBF1 /AC: RSP01256//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: GBF1 BS3 /TF: GBF1
 1339. Group TF: Opaque-2 (O2) /AC: RSP01469//OS: Zea mays /GENE: alpha-22kDa zein/RE: Z1 /TF: Opaque-2 (O2)
 1535. Group TF: STF1/HY5 /AC: RSP01727//OS: Arabidopsis thaliana /GENE: SAUR-AC1-like (At3g60690)/RE: G-box (2) /TF: STF1/HY5

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