> PLPR0427 ..AC:X61293.1 ..OS:Phaseolus vulgaris ..GENE:gln-delta ..PROD:plastid-located glutamine synthetase ..[ -200: +51] ..CDS:+1619 ..TSS:201 (+1) # Alternative TSS(s): +13 |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.31 G - 0.17 T - 0.27 C - 0.25
1 cataatatgt tgaaagaaaa aaaggtagcc gagaagaacc ttatctgtaa
51 catttggaga gcaaggttct cttgatgctc ttaaagggac caaaaacaaa
101 tttcatccac tcgtaacaca cccctatcgg ttttagaaaa gccaagaaag
151 tttgtgtcca ccaaccccta ttttacacca gtctctccta ctctgatata
201 CTATAGCTGC TCTTCTCACT GTGTCTCAGG TGGTGACACA CTCAGACTCA
251 C
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00078 Mean Expected Number 0.001 +strand -43 : -32 CCACCAACCCCt
AC RSP00874 Mean Expected Number 0.009 +strand -122 : -112 TCTTAAAGGGa
Totally 2 motifs of 2 different REs have been found
Description of REs found
77. Group RE: AC-II /AC: RSP00078//OS: Phaseolus vulgaris /GENE: PAL2/RE: AC-II /TF: unknown
810. Group TF: Dof3 /AC: RSP00874//OS: Zea mays /GENE: Synthetic oligonucleotids/RE: Dof3 BSopt /TF: Dof3
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