> PLPR0441 ..AC:X87109.1 ..OS:Oryza sativa (indica cultivar-group) ..GENE:RC24 ..PROD:chitinase ..[ -200:  +51]  ..CDS:  +57 ..TSS:201 (+1) # Alternative TSS(s): +3 |Taxon: Monocot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.30   G -  0.16   T -  0.27   C -  0.26

      1  tcggtgtaac tgaactcaga tcatctatcc gatctgatcg gagtacatat
     51  ttgaccaaca ccatatacat ccatgaataa tttggatata caatagtgga
    101  gtATTGAaga gttactgtta atcgtggcaa gatgccaaac actgcacaca
    151  ccagctagct tccctcctTA TATAAAgcca tggcctccca ccgcttctta
    201  ACATCACTGC AACTCAGCAG CAAGCAAGCT AACTCCATTT TGCTTTGCAT
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00320   Mean Expected Number 0.002   +strand   -182 : -172   GATCATCtATC
AC RSP00447   Mean Expected Number 0.004   -strand    +49 :  +40   tGCAAAGCAA
AC RSP00996   Mean Expected Number 0.007   -strand   -176 : -185   GATGATCTGA
AC RSP01470   Mean Expected Number 0.009   -strand   -125 : -134   TCATGgATGT

  Totally       4 motifs of     4 different REs have been found


Description of REs found

  306. Group RE: Box I /Group TF: RNFG1 /AC: RSP00320//OS: Oryza sativa tungro bacillform virus (RTBV; plant pararetrovirus) /GENE: RTBV promoter/RE: Box I /TF: RNFG1
  427. Group TF: Dof1 /AC: RSP00447//OS: Zea mays /GENE: pepcZm2A/RE: box b /TF: Dof1
  917. Group TF: Opaque-2 (O2) /AC: RSP00996//OS: Zea mays /GENE: cyPPDK1/RE: O2 BS-1 /TF: Opaque-2 (O2)
 1340. Group TF: Opaque-2 (O2) /AC: RSP01470//OS: Zea mays /GENE: alpha-22kDa zein/RE: Z2 /TF: Opaque-2 (O2)