> PLPR0445 ..AC:X63102.1 ..OS:Phaseolus vulgaris ..GENE:pEP-C1a ..PROD:endopeptidase ..[ -200: +51] ..CDS: +37 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
Nucleotide Frequencies: A - 0.25 G - 0.13 T - 0.36 C - 0.26
1 gcttgagcaa cacaaacaca tcctacatct gttccccaca attctctgag
51 tgtgtgccac agcttggtat cttcatgatt ggtcattgtt gatgccccat
101 aaggaacatg taacttcctc attatttATT GCttttgttt tcttctcact
151 tgttaacttt tatttcccTA TATAAAgcct cctttcttcc cttcccttct
201 CATCTTCCAT TGAGTTGATT GATTCCAAAC ACAAACATGG CAACAAAGAA
251 G
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00231 Mean Expected Number 0.007 -strand -119 : -125 CCAATCA
AC RSP01000 Mean Expected Number 0.007 +strand -109 : -100 ATGCCCCAtA
Totally 2 motifs of 2 different REs have been found
Description of REs found
224. Group RE: CCAAT box 1 /AC: RSP00231//OS: Arabidopsis thaliana /GENE: AGAMAOUS (AG)/RE: CCAAT box 1 /TF: unknown
921. Group TF: CBF /AC: RSP01000//OS: Agrobacterium tumefaciens /GENE: T-cyt/RE: 3'-III element /TF: CBF
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