> PLPR0446 ..AC:U01890.1 ..OS:Lycopersicon penellii ..GENE:His1 ..PROD:histone H1 protein ..[ -200:  +51]  ..CDS:  +40 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.37   G -  0.17   T -  0.28   C -  0.18

      1  tctagataag aataacagct cttaatcaaa atacacaact aaatcaacgt
     51  ctagataaca tccacgtgtg agcatctaat taattcttca gaaaacttcg
    101  atccgtgtca ccttaaattg aCCAATcaaa atgcagagag ttgtgaaacc
    151  aggatcgtta ctcttatTAT AAATTgcgta agttgcatta cagaatgatc
    201  ACAGAAACGG TTATTGAGAT ATTTTTGAGA ATTGAGAAGA TGACGGCAAT
    251  C

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00340   Mean Expected Number 0.002   +strand   -140 : -131   TCCACGTGTg
AC RSP00467   Mean Expected Number 0.004   -strand    -77 :  -86   TGGTCAATTt
AC RSP00468   Mean Expected Number 0.002   -strand    -76 :  -86   TTGGTCAATTt
AC RSP00524   Mean Expected Number 0.006   -strand   -132 : -138   ACACGTG
AC RSP00836   Mean Expected Number 0.001   -strand    -94 : -101   CACGGATC
AC RSP01255   Mean Expected Number 0.001   -strand   -132 : -139   ACACGTGG
AC RSP01482   Mean Expected Number 0.002   +strand    -86 :  -76   aAATTGACCAA
AC RSP01507   Mean Expected Number 0.001   +strand   -101 :  -94   GATCCGTG
AC RSP01518   Mean Expected Number 0.000   +strand   -101 :  -75   GATCCGTG-- ** bp --CCAAT
AC RSP01734   Mean Expected Number 0.007   +strand   -140 : -134   TCCACGT

  Totally      10 motifs of    10 different REs have been found


Description of REs found

  325. Group TF: SGBF-1; SGBF-2 /AC: RSP00340//OS: Glycine max /GENE: GmAux28/RE: B1-core /TF: SGBF-1; SGBF-2 ||Identical REs AC:  RSP00965
  445. Group RE: ERE1 /AC: RSP00467//OS: Dianthus caryophyylus /GENE: hcbt2/RE: ERE1 /TF: unknown
  446. Group RE: ERE2 /AC: RSP00468//OS: Dianthus caryophyylus /GENE: hcbt2/RE: ERE2 /TF: unknown
  500. Group TF: DPBF-1; DPBF-2 /AC: RSP00524//OS: Daucus carota /GENE: Dc3/RE: E4-core /TF: DPBF-1; DPBF-2
  781. Group RE: dOCT /AC: RSP00836//OS: Arabidopsis thaliana /GENE: H4A748/RE: dOCT /TF: unknown ||Identical REs AC:  RSP00852
 1158. Group TF: GBF1 /AC: RSP01255//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: GBF1 BS2 /TF: GBF1
 1350. Group RE: ERE2 /AC: RSP01482//OS: carnation (Dianthus caryophillus) /GENE: hcbt2/RE: ERE2 /TF: unknown ||Identical REs AC:  RSP01483
 1363. Group RE: Oct-p /AC: RSP01507//OS: Triticum aestivum /GENE: H1 (TH315)/RE: Oct-p /TF: unknown ||Identical REs AC:  RSP01508
 1369. Group RE: Type III element /AC: RSP01518//OS: Triticum aestivum /GENE: H2B (TH 153)/RE: Type III element /TF: unknown
 1542. Group TF: CAMTA3 /AC: RSP01734//OS: Arabidopsis thaliana /GENE: CBF2/RE: CM4 /TF: CAMTA3