> PLPR0447 ..AC:X53596.1 ..OS:Oryza sativa (indica cultivar-croup) ..GENE:Osgrp-1 ..PROD:glycine-rich cell wall protein ..[ -200:  +51]  ..CDS: +224 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.31   G -  0.21   T -  0.30   C -  0.18

      1  atgaataaaa atagtcgtgt tagtcttacc tgatgtgcac tctaaactcg
     51  attacccacg gtttttatga tactgaagcg gaggccctct tcagaagtaa
    101  accacaagtg acaacacaag gttaaaaaaa atgagataat taaatatgag
    151  tgagagttgt ttctggtgtt gtttgcttcg acagagcaaa atcttgccta
    201  CTTTGATCGA TGACTACTTT GACTTTCTGT TTGGGCCACC GTAGAAAGAC
    251  A

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00125   Mean Expected Number 0.002   -strand   -186 : -197   AcTATTTTTATT
AC RSP00741   Mean Expected Number 0.002   +strand    -85 :  -74   AcAAGGTTAAAA
AC RSP00940   Mean Expected Number 0.006   -strand    +46 :  +37   TTCTACGGTG
AC RSP01017   Mean Expected Number 0.006   -strand    -37 :  -44   AGAAACAA

  Totally       4 motifs of     4 different REs have been found


Description of REs found

  123. Group RE: AT-1 (3) /AC: RSP00125//OS: Nicotiana plumbaginifolia /GENE: cab-E/RE: AT-1 (3) /TF: unknown ||Identical REs AC:  RSP00133  RSP00788
  703. Group RE: box 1 /Group TF: GT-1 /AC: RSP00741//OS: Nicotiana plumbaginifolia /GENE: Cab-E/RE: box 1 /TF: GT-1
  869. Group TF: GBF /AC: RSP00940//OS: Lycopersicon esculentum /GENE: RbcS-3.6/RE: box II* /TF: GBF
  942. Group TF: AEF /AC: RSP01017//OS: Arabidopsis thaliana /GENE: GapA/RE: AE box 2 /TF: AEF

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