> PLPR0450 ..AC:X57005.1 ..OS:Helianthus annuus ..GENE:GUbB1 ..PROD:hexaubiquitin  protein ..[ -200:  +51]  ..CDS:+1054 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.24   G -  0.10   T -  0.33   C -  0.33

      1  aagctacgtt ctctttctag attctatgcc ctacctaccg tgtggtgcac
     51  aacaacttga cccccatcat tgactctcca ccgtacacgt gtcacgatac
    101  catttgttgg tctcctacca cttacgtaac attaatattc catccgtgac
    151  cgcctcttct tcatcatccT ATAAATTcac cttcttatct cttccgcttt
    201  CATTCGTTCA TCATCATCAC AATTAACAAC AATCCAAAGC AATCTTCTCT
    251  C

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00340   Mean Expected Number 0.009   +strand   -117 : -108   TaCACGTGTC
AC RSP00454   Mean Expected Number 0.001   +strand    -78 :  -68   TACGTAACATt
AC RSP00462   Mean Expected Number 0.002   -strand     -6 :  -18   GGAaGAGATAAGA
AC RSP00524   Mean Expected Number 0.005   +strand   -116 : -110   ACACGTG
AC RSP00524   Mean Expected Number 0.007   -strand   -109 : -115   ACACGTG
AC RSP00937   Mean Expected Number 0.002   +strand    -18 :   -6   TCTTATCTCtTCC
AC RSP01035   Mean Expected Number 0.007   +strand   -114 : -108   ACGTGTC
AC RSP01092   Mean Expected Number 0.005   -strand   -174 : -184   ATAGAATCTAg
AC RSP01256   Mean Expected Number 0.002   +strand   -116 : -109   ACACGTGT
AC RSP01256   Mean Expected Number 0.002   -strand   -109 : -116   ACACGTGT
AC RSP01717   Mean Expected Number 0.000   +strand   -118 : -107   GTACACGTGTcA

  Totally      11 motifs of     9 different REs have been found


Description of REs found

  325. Group TF: SGBF-1; SGBF-2 /AC: RSP00340//OS: Glycine max /GENE: GmAux28/RE: B1-core /TF: SGBF-1; SGBF-2 ||Identical REs AC:  RSP00965
  432. Group RE: Motif e/f /AC: RSP00454//OS: Pisum sativum /GENE: PSPAL2/RE: Motif e/f /TF: unknown
  440. Group RE: I-box /Group TF: IBF /AC: RSP00462//OS: Lycopersicon esculentum /GENE: RBCS1; RBCS2; RBCS3A;/RE: I-box /TF: IBF
  500. Group TF: DPBF-1; DPBF-2 /AC: RSP00524//OS: Daucus carota /GENE: Dc3/RE: E4-core /TF: DPBF-1; DPBF-2
  866. Group TF: GBF /AC: RSP00937//OS: Lycopersicon esculentum /GENE: RbcS-3A/RE: I box /TF: GBF
  960. Group TF: ABI3; ABI5; AREB1 /AC: RSP01035//OS: Arabidopsis thaliana /GENE: RD29B/RE: ABRE 3 /TF: ABI3; ABI5; AREB1
 1010. Group RE: box 1* /AC: RSP01092//OS: Pisum sativum /GENE: GS2/RE: box 1* /TF: unknown
 1159. Group TF: GBF1 /AC: RSP01256//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: GBF1 BS3 /TF: GBF1
 1525. Group RE: G-box /Group TF: STF1/HY5 /AC: RSP01717//OS: Arabidopsis thaliana /GENE: ARF18 (At1g23750)/RE: G-box /TF: STF1/HY5