> PLPR0454 ..AC:D11433.1 ..OS:Oryza sativa (japonica cultivar-group) ..GENE:RAG1 ..PROD:allergenic protein ..[ -200:  +51]  ..CDS:  +26 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.35   G -  0.15   T -  0.29   C -  0.22

      1  cactttaacc atctgttgtc catatgatgc cccagattag gcgtgtgaat
     51  cacaatagat gtttcataca gaaccacaag caaatccata aatagctcat
    101  gaacagccaa aaaatttcta tctgttcttg aatcactttg gtctttatag
    151  ctaTATATAA Aaccacccag agacgaagag cctagctatc acagttaatt
    201  AAGATTTTTC ACAAACTAAG CAAAATATGG CTTCCAACAA GGTAGTGTTC
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00629   Mean Expected Number 0.009   -strand     +9 :   +2   AAAAATCT
AC RSP01000   Mean Expected Number 0.007   +strand   -174 : -165   ATGCCCCAgA

  Totally       2 motifs of     2 different REs have been found


Description of REs found

  605. Group TF: CCA1 /AC: RSP00629//OS: Arabidopsis thaliana /GENE: Lhcb1*3/RE: CCA1 BS2 /TF: CCA1
  921. Group TF: CBF /AC: RSP01000//OS: Agrobacterium tumefaciens /GENE: T-cyt/RE: 3'-III element /TF: CBF