> PLPR0458 ..AC:X14564.1 ..OS:Arabidopsis thaliana ..GENE:ats3B ..PROD:ribulose-1,5-biphosphate carboxylase small subunit (rbcS) (EC 4.1.1.39) ..[ -200:  +51]  ..CDS:  +56 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.34   G -  0.23   T -  0.23   C -  0.20

      1  cccccacaag agaaaagata agataatgga gttttctgcc acgtggcctt
     51  atcctagtgg tgcgtaccga taagggtgtc aacacctttc cttaatcctg
    101  tggcagtaaa cgacgttatc atgaatcatg gaccctttga tcatgagggc
    151  ttttcgcctt tagggggttc tcatTATATA AAgatgacaa caccagtagg
    201  AAAACAAGTC AGTAAGTAAA CGAGCAAAAG AAGAAGAGAA ACAACAAGAA
    251  G

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00063   Mean Expected Number 0.002   +strand   -163 : -154   GCCaCGTGGC
AC RSP00063   Mean Expected Number 0.003   -strand   -154 : -163   GCCaCGTGGC
AC RSP00073   Mean Expected Number 0.003   +strand   -163 : -154   GCCACGTGGC
AC RSP00073   Mean Expected Number 0.003   -strand   -154 : -163   GCCACGTGGC
AC RSP00153   Mean Expected Number 0.003   +strand   -162 : -153   CCACGTGGCC
AC RSP00153   Mean Expected Number 0.003   -strand   -155 : -164   CCACGTGGCa
AC RSP00175   Mean Expected Number 0.002   +strand   -161 : -154   CACGTGGC
AC RSP00175   Mean Expected Number 0.002   -strand   -156 : -163   CACGTGGC
AC RSP00204   Mean Expected Number 0.003   +strand   -163 : -154   GcCACGTGGC
AC RSP00204   Mean Expected Number 0.002   -strand   -154 : -163   GcCACGTGGC
AC RSP00227   Mean Expected Number 0.005   +strand   -186 : -178   AAGATAAGA
AC RSP00682   Mean Expected Number 0.003   +strand   -163 : -154   GCCACGTGGc
AC RSP00682   Mean Expected Number 0.002   -strand   -154 : -163   GCCACGTGGc
AC RSP00718   Mean Expected Number 0.002   +strand   -162 : -155   CCACGTGG
AC RSP00718   Mean Expected Number 0.002   -strand   -155 : -162   CCACGTGG
AC RSP00724   Mean Expected Number 0.000   +strand   -184 : -154   GATAAGA-- ** bp --CACGTGGC
AC RSP01034   Mean Expected Number 0.009   +strand   -160 : -154   ACGTGGC
AC RSP01034   Mean Expected Number 0.008   -strand   -157 : -163   ACGTGGC
AC RSP01053   Mean Expected Number 0.003   +strand   -184 : -176   GATAAGATA

  Totally      19 motifs of    11 different REs have been found


Description of REs found

   62. Group RE: Motif III /AC: RSP00063//OS: Oryza sativa /GENE: rab16B/RE: Motif III /TF: unknown
   72. Group TF: TAF-1 /AC: RSP00073//OS: Nicotiana tabacum /GENE: Synthetic OLIGO/RE: PA /TF: TAF-1 ||Identical REs AC:  RSP00274
  149. Group RE: Box II /AC: RSP00153//OS: Petroselinum crispum /GENE: CHS/RE: Box II /TF: CPRF-1; CPRF-2; CPRF-3; ||Identical REs AC:  RSP00154
  169. Group RE: ABRE /Group TF: ABF /AC: RSP00175//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: ABRE /TF: ABF ||Identical REs AC:  RSP00723  RSP01570
  197. Group TF: ABI5 /AC: RSP00204//OS: Arabidopsis thaliana /GENE: AtEm6/RE: ABRE/6.2 /TF: ABI5 ||Identical REs AC:  RSP01151
  220. Group TF: GT-1 /AC: RSP00227//OS: Pisum sativum /GENE: rbcS-3A/RE: BOX III* /TF: GT-1
  651. Group TF: GBF3 /AC: RSP00682//OS: Arabidopsis thaliana /GENE: Adh/RE: -214 G-box (core) /TF: GBF3
  683. Group TF: GBF /AC: RSP00718//OS: Arabidopsis thaliana /GENE: Adh/RE: G-box-1 /TF: GBF ||Identical REs AC:  RSP01254
  688. Group TF: HY5 /AC: RSP00724//OS: Nicotiana plumbaginifolia /GENE: rbcS 8B/RE: I/G-box /TF: HY5
  959. Group TF: ABI3; ABI5; AREB1 /AC: RSP01034//OS: Arabidopsis thaliana /GENE: RD29B/RE: ABRE 1/2 /TF: ABI3; ABI5; AREB1
  973. Group TF: HvMCB1 /AC: RSP01053//OS: Hordeum vulgare /GENE: ITR1/RE: GATA-core /TF: HvMCB1