> PLPR0459 ..AC:X54306.1 ..OS:Papaver somniferum ..GENE:gMLP15 ..PROD:major latex protein ..[ -200: +51] ..CDS: +214 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
Nucleotide Frequencies: A - 0.34 G - 0.17 T - 0.31 C - 0.18
1 aatgatgggg tcactcgttg ttgagcgcat gtgcggaaca ctattacgac
51 aatacttggg tatcaaacaa ctaacaatcc ttgattaact aggataaaag
101 acaactgtgt agtacaaaac catttgcaga caaccgtgtt aatttgacat
151 ttggtaaaat aagcatgcta ataTATAATT Atctcacaaa atcttatcct
201 GTCTTCAAAA TCTTTGATTC TTTCCAAGAT AGAGTTGAAT GATTGTTGTC
251 C
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00960 Mean Expected Number 0.005 +strand -133 : -126 CAACTAAC
AC RSP01091 Mean Expected Number 0.008 -strand +23 : +13 AaAGAATCAAA
AC RSP01604 Mean Expected Number 0.004 +strand -97 : -90 ACTGTGTA
Totally 3 motifs of 3 different REs have been found
Description of REs found
885. Group TF: HvGAMYB /AC: RSP00960//OS: Hordeum vulgare /GENE: ITR1/RE: MYB BS /TF: HvGAMYB
1009. Group RE: box 1 /AC: RSP01091//OS: Pisum sativum /GENE: GS2/RE: box 1 /TF: unknown
1425. Group TF: SPF1 /AC: RSP01604//OS: Ipomoea batatas /GENE: Sporamin; beta-amylase/RE: SP8a /TF: SPF1
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