> PLPR0466 ..AC:AJ288901.1 AF198174.1 ..OS:Dendrobium grex Madame Thong-IN ..GENE:DOMADS1 ..PROD:MADS box protein DOMADS1 ..[ -200:  +51]  ..CDS:  +27 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.34   G -  0.26   T -  0.21   C -  0.19

      1  tctctataac cacttttacc acccacaaca ctacgagagt aaaagataaa
     51  aaggagaagg caaatgggga agtagggcaa cgaatggggc ctcccctctt
    101  cacgtcttgc tttcatggcc taaaaatgga aaaaatgaat gcctcatctc
    151  ttccctcaga ggaaggaaac ttagctttct gatctccagt gttttagctg
    201  AGAACGAAGG GAGAGAAAGA GAAAGAAATG GGGAGAGGAA GGGTGGAGAT
    251  G

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00860   Mean Expected Number 0.009   +strand    +20 :  +28   AGAAAGAAA
AC RSP00861   Mean Expected Number 0.007   +strand    +14 :  +22   AGAAAGAGA
AC RSP00870   Mean Expected Number 0.004   -strand   -181 : -190   gGTAAAAGTG
AC RSP01006   Mean Expected Number 0.007   +strand   -183 : -177   ACCACCC
AC RSP01233   Mean Expected Number 0.004   -strand    -90 :  -96   AGCAAGA

  Totally       5 motifs of     5 different REs have been found


Description of REs found

  796. Group TF: BPC1 /AC: RSP00860//OS: Arabidopsis thaliana /GENE: STK/RE: GA-1 /TF: BPC1
  797. Group TF: BPC1 /AC: RSP00861//OS: Arabidopsis thaliana /GENE: STK/RE: GA-2 /TF: BPC1
  806. Group RE: EM2 /AC: RSP00870//OS: Triticum aestivum /GENE: LMWG-1D1/RE: EM2 /TF: unknown
  931. Group TF: PtMYB1; PtMYB4 /AC: RSP01006//OS: Pinus sylvestris /GENE: PsGS1b/RE: GS1b AC box 1 (AC-II) /TF: PtMYB1; PtMYB4
 1138. Group RE: PLE-79 /AC: RSP01233//OS: Collettrichum lindemuthianum (bean pathogen) /GENE: CLPG2/RE: PLE-79 /TF: unknown