> PLPR0470 ..AC:AB006778.1 ..OS:Arabidopsis thaliana ..GENE:vsp2 ..PROD:vegetative storage protein ..[ -200:  +51]  ..CDS:  +28 ..TSS:201 (+1) # Alternative TSS(s): +5 |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.37   G -  0.10   T -  0.27   C -  0.25

      1  acgtgcacta aaaacgagtg gtgtaagtga aaaatatcgt cgattataaa
     51  cattatggga ccagtagcat ttgttgcacc aatcgaaaac agacaagcac
    101  acatatctcc tcatttctca tctggcttct taatcatttc tcataacccc
    151  acctcatTAT AAATAccacc ctttgcgtca cacatataaa catcacaaac
    201  TAAACAATAA ACCATACCAT AAAAAACATG AAAATCCTCT CACTTTCACT
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00404   Mean Expected Number 0.003   +strand    -29 :  -23   TTTGCGT
AC RSP00509   Mean Expected Number 0.003   +strand    -43 :  -32   TATAAATACCAc
AC RSP00635   Mean Expected Number 0.001   -strand   -139 : -146   GGTCCCAT
AC RSP00970   Mean Expected Number 0.000   -strand    -20 :  -28   GTGACGCAA
AC RSP01601   Mean Expected Number 0.008   +strand    +44 :  +51   TTTCACTT
AC RSP01601   Mean Expected Number 0.005   -strand   -169 : -176   TTTCACTT

  Totally       6 motifs of     5 different REs have been found


Description of REs found

  386. Group RE: adja /AC: RSP00404//OS: Nicotiana tabacum /GENE: RNP2/RE: adja /TF: unknown
  485. Group RE: TATA box /AC: RSP00509//OS: Avena fatua /GENE: alpha-Amy2/A/RE: TATA box /TF: unknown
  611. Group RE: NDE Box 3 /AC: RSP00635//OS: Glycine max /GENE: SAUR 15A/RE: NDE Box 3 /TF: unknown
  893. Group TF: STF1; STF2; STGA1 /AC: RSP00970//OS: Glycine max /GENE: Auxin-regulated genes/RE: CRE (G/A) /TF: STF1; STF2; STGA1
 1422. Group RE: Inr /AC: RSP01601//OS: Spinacia oleracea /GENE: PsaDb/RE: Inr /TF: unknown