> PLPR0472 ..AC:Y14572.1 ..OS:Solanum tuberosum ..GENE:phyB ..PROD:phytochrome B ..[ -200:  +51]  ..CDS: +137 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.38   G -  0.14   T -  0.32   C -  0.16

      1  tacgcaaagt aaaagtatag gtagttaatc aactaaccga gctactaata
     51  tttttggagt ataggcagtt tcttaaattt gaagaggtaa aaaagtattt
    101  cagagaaaaa aaacaaaaaa tactATTGGa caaacaggtc caccatattg
    151  cttcaattac tgcaactagT ATAAAATttg tgacaacccc atttctgtat
    201  TCAACCAAAA ATTCAATCTT TTTTGGAGTT TCCCAAAAGT CAGTTTTTTT
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00405   Mean Expected Number 0.003   +strand   -148 : -141   TTTGGAGT
AC RSP00405   Mean Expected Number 0.003   +strand    +22 :  +29   TTTGGAGT
AC RSP00960   Mean Expected Number 0.006   +strand   -171 : -164   CAACTAAC
AC RSP01250   Mean Expected Number 0.004   +strand     +8 :  +17   AAAATTCAAT

  Totally       4 motifs of     3 different REs have been found


Description of REs found

  387. Group RE: adjb /AC: RSP00405//OS: Nicotiana tabacum /GENE: RNP2/RE: adjb /TF: unknown
  885. Group TF: HvGAMYB /AC: RSP00960//OS: Hordeum vulgare /GENE: ITR1/RE: MYB BS /TF: HvGAMYB
 1154. Group TF: CBF-C /AC: RSP01250//OS: Arabidopsis thaliana /GENE: AtpC/RE: CBF-C BS /TF: CBF-C

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