> PLPR0478 ..AC:M28156.1 ..OS:Oryza sativa (japonica cultivar-group) Gt1 ..PROD:glutelin 1 ..[ -200:  +51]  ..CDS:  +40 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.35   G -  0.12   T -  0.30   C -  0.23

      1  aaaagaaaga gagaaagaac aacacaatgc tgcgtcaatt atacatatct
     51  gtatgtccat cattattcat ccacctttcg tgtaccacac ttcatatatc
    101  ataagagtca cttcacgtct ggacattaac aaactctatc ttaacattta
    151  gatgcaagag cctttatctc acTATAAATG cacgatgatt tctcattgtt
    201  TCTCACAAAA AGCATTCAGT TCATTAGTCC TACAACAACA TGGCATCCAT
    251  A

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00192   Mean Expected Number 0.004   +strand    -74 :  -63   TAACAAACTCTA
AC RSP00195   Mean Expected Number 0.001   +strand   -124 : -114   TtCGTGTACCA
AC RSP00642   Mean Expected Number 0.009   +strand    -26 :  -19   TAAATGCA
AC RSP00691   Mean Expected Number 0.000   +strand   -126 : -112   CTTTCGTGTACCACA
AC RSP00692   Mean Expected Number 0.000   +strand   -177 : -160   ACAATGCTGCGTCAATTA
AC RSP00694   Mean Expected Number 0.001   +strand    -73 :  -61   AACAAACTCTATC
AC RSP00861   Mean Expected Number 0.001   +strand   -197 : -189   AGAAAGAGA
AC RSP01017   Mean Expected Number 0.005   -strand     +3 :   -5   AGAAACAA

  Totally       8 motifs of     8 different REs have been found


Description of REs found

  185. Group RE: AACA motif /AC: RSP00192//OS: Oryza sativa /GENE: Gt3/RE: AACA motif /TF: unknown
  188. Group RE: Box II /AC: RSP00195//OS: Oryza sativa /GENE: Gt2/RE: Box II /TF: unknown
  617. Group RE: L1-box /AC: RSP00642//OS: Arabidopsis thaliana /GENE: PDF1/RE: L1-box /TF: unknown
  657. Group RE: Box II /AC: RSP00691//OS: Oryza sativa /GENE: Gt1/RE: Box II /TF: unknown
  658. Group RE: Box III /AC: RSP00692//OS: Oryza sativa /GENE: Gt1/RE: Box III /TF: unknown
  660. Group RE: AACAA motif /AC: RSP00694//OS: Oryza sativa /GENE: Gt1/RE: AACAA motif /TF: unknown ||Identical REs AC:  RSP01062
  797. Group TF: BPC1 /AC: RSP00861//OS: Arabidopsis thaliana /GENE: STK/RE: GA-2 /TF: BPC1
  942. Group TF: AEF /AC: RSP01017//OS: Arabidopsis thaliana /GENE: GapA/RE: AE box 2 /TF: AEF