> PLPR0487 ..AC:X81088.1 ..OS:Hordeum vulgare ..GENE:LEA B19.4 ..PROD:late embryogenic abundant protein B19.4 ..[ -200:  +51]  ..CDS:  +98 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.26   G -  0.22   T -  0.17   C -  0.35

      1  cgagtcgcta gcattggcag ctcatccaaa accctacatg tcggtgccca
     51  tgcaagctac cacatgtcat cccaccagag gcttgcatgc acgacgcgtc
    101  ttgatacaac aggaacatgg agaggtacac gcgccggctc ctagccgtcc
    151  gaagctcctc ctcgccggcT ATATAATctc gacgtcgcta gcccctccgc
    201  CATCACCATC AGGCAATCAC AGAGCACCAC GAGCAGTAGC ATACAAAACC
    251  C

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00107   Mean Expected Number 0.005   -strand   -112 : -118   CATGCAA
AC RSP00146   Mean Expected Number 0.006   -strand    -25 :  -31   TTATATA
AC RSP00460   Mean Expected Number 0.003   +strand   -140 : -131   cACATGTCAT
AC RSP00759   Mean Expected Number 0.006   -strand    -24 :  -30   ATTATAT
AC RSP00913   Mean Expected Number 0.005   -strand   -130 : -139   GATGACATGT
AC RSP00997   Mean Expected Number 0.007   -strand   -130 : -139   GATGACATGT

  Totally       6 motifs of     6 different REs have been found


Description of REs found

  105. Group RE: RY2 /AC: RSP00107//OS: Phaseolus vulgaris /GENE: beta-phaseolin, or phas/RE: RY2 /TF: unknown
  142. Group RE: TATA1 /AC: RSP00146//OS: Phaseolus vulgaris /GENE: beta-phaseolin, or phas/RE: TATA1 /TF: unknown
  438. Group TF: O2 /AC: RSP00460//OS: coix /GENE: alpha-coixin/RE: O2d /TF: O2
  721. Group RE: submotif D /AC: RSP00759//OS: Solanum tuberosum /GENE: S2-RNase/RE: submotif D /TF: unknown
  844. Group TF: Opaque-2 /AC: RSP00913//OS: Zea mays /GENE: b-32/RE: B1 /TF: Opaque-2
  918. Group TF: Opaque-2 (O2) /AC: RSP00997//OS: Zea mays /GENE: cyPPDK1/RE: O2 BS-2 /TF: Opaque-2 (O2)