> PLPR0492 ..AC:Z95153.2 ..OS:Helianthus annuus ..GENE:hsp17.6 G1 ..PROD:17.6 kDa class I small heat-shock protein HSP17.6 ..[ -200:  +51]  ..CDS:  +35 ..TSS:201 (+1) # Alternative TSS(s): -8 |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.42   G -  0.07   T -  0.25   C -  0.25

      1  aatagttata taaaaaataa aacatttata aacgatatat actaagagtt
     51  ccacataata atccgtagaa aaaaaagctt attctctatc tgtccagata
    101  agtacagaat atttcagaac actactacgt tgGCAATatc caacagaagc
    151  cacctcaaca cttccctccT ATAAATAcca ccattcatat ccactcacac
    201  AACACATTAA CACTCACAAC TCAAAAACAT TCACCATGTC AATCATTCCA
    251  A

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00011   Mean Expected Number 0.002   +strand   -124 : -115   GCTTATTCTC
AC RSP00132   Mean Expected Number 0.002   +strand    -52 :  -45   GCCACCTC
AC RSP00509   Mean Expected Number 0.004   +strand    -31 :  -20   TATAAATACCAc
AC RSP00850   Mean Expected Number 0.001   -strand    -67 :  -72   GCCAAC
AC RSP01290   Mean Expected Number 0.000   +strand   -105 :  -81   AGATAAGTACAGAATATTTCAGAAC
AC RSP01301   Mean Expected Number 0.003   +strand    -32 :  -23   CTATAAATAC

  Totally       6 motifs of     6 different REs have been found


Description of REs found

   11. Group RE: C2b-BS /AC: RSP00011//OS: Oryza sativa tungro bacillform virus (RTBV; plant pararetrovirus) /GENE: RTBV promoter/RE: C2b-BS /TF: unknown
  130. Group TF: ROM1; ROM2 /AC: RSP00132//OS: Phaseolus vulgaris /GENE: beta-phaseolin, or phas/RE: vicilin box /TF: ROM1; ROM2
  485. Group RE: TATA box /AC: RSP00509//OS: Avena fatua /GENE: alpha-Amy2/A/RE: TATA box /TF: unknown
  790. Group RE: CAT /AC: RSP00850//OS: Zea mays /GENE: H4C7/RE: CAT /TF: unknown
 1187. Group RE: HSE /AC: RSP01290//OS: Helianthus annuus /GENE: Ha hsp17.6 G1/RE: HSE /TF: unknown
 1195. Group RE: TATA box /Group TF: TBF /AC: RSP01301//OS: Triticum aestivum /GENE: Amy2/54/RE: TATA box /TF: TBF ||Identical REs AC:  RSP01302

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