> PLPR0495 ..AC:X83077.1 ..OS:Zea mays ..GENE:Fer2 ..PROD:ferritin ..[ -200:  +51]  ..CDS: +109 ..TSS:201 (+1) # Alternative TSS(s): +6 |Taxon: Monocot |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.19   G -  0.17   T -  0.20   C -  0.44

      1  ctgagcttgc tttgagccct cctcgctcgc tcgctcacct tcttatctcc
     51  tccatccatc caaaaatatc tccatgcgct cagacgggga cgagacgacg
    101  ggagaaccac caccagggcg cccgcccgcc acgcgcctcc tccaaatccc
    151  agccgtccac gtgtcccagt ccgcgacccc cacgcgccta tatccatcca
    201  TCATCCTATT CCTATCCCGC CACATAGTCC ACCACCTATT ATTCCGCTCC
    251  C

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00018   Mean Expected Number 0.006   -strand   -134 : -140   ATTTTTG
AC RSP00060   Mean Expected Number 0.005   +strand    -70 :  -59   ACGCGCCTCCTC
AC RSP00068   Mean Expected Number 0.006   -strand    -36 :  -45   GACACGTgGA
AC RSP00188   Mean Expected Number 0.004   +strand    -45 :  -36   TCcACGTGTC
AC RSP00204   Mean Expected Number 0.006   -strand    -36 :  -45   GACACGTGGa
AC RSP00340   Mean Expected Number 0.000   +strand    -45 :  -36   TCCACGTGTC
AC RSP00462   Mean Expected Number 0.000   -strand   -148 : -160   GGAgGAGATAAGA
AC RSP00550   Mean Expected Number 0.003   -strand    +31 :  +21   TGGAcTATGTG
AC RSP00682   Mean Expected Number 0.006   -strand    -36 :  -45   GaCACGTGGA
AC RSP00937   Mean Expected Number 0.000   +strand   -160 : -148   TCTTATCTCcTCC
AC RSP01081   Mean Expected Number 0.003   +strand   -150 : -139   TCCAtCCATCCA
AC RSP01115   Mean Expected Number 0.006   +strand   -140 : -134   CAAAAAT
AC RSP01255   Mean Expected Number 0.005   -strand    -37 :  -44   ACACGTGG
AC RSP01274   Mean Expected Number 0.008   +strand    -45 :  -36   TCCACGTgTC
AC RSP01499   Mean Expected Number 0.001   -strand   -110 : -119   gTCCCCGTCT

  Totally      15 motifs of    15 different REs have been found


Description of REs found

   17. Group TF: SEF4 /AC: RSP00018//OS: Glycine max /GENE: beta-conglycinin/RE: SEF4 /TF: SEF4
   59. Group TF: ABF /AC: RSP00060//OS: Zea mays /GENE: rab28/RE: CE3 /TF: ABF
   67. Group RE: UV LRE /AC: RSP00068//OS: Arabidopsis thaliana /GENE: CHS/RE: UV LRE /TF: unknown
  182. Group TF: ABI5 /AC: RSP00188//OS: Arabidopsis thaliana /GENE: AtEm1/RE: ABRE/1.2 /TF: ABI5
  197. Group TF: ABI5 /AC: RSP00204//OS: Arabidopsis thaliana /GENE: AtEm6/RE: ABRE/6.2 /TF: ABI5 ||Identical REs AC:  RSP01151
  325. Group TF: SGBF-1; SGBF-2 /AC: RSP00340//OS: Glycine max /GENE: GmAux28/RE: B1-core /TF: SGBF-1; SGBF-2 ||Identical REs AC:  RSP00965
  440. Group RE: I-box /Group TF: IBF /AC: RSP00462//OS: Lycopersicon esculentum /GENE: RBCS1; RBCS2; RBCS3A;/RE: I-box /TF: IBF
  526. Group RE: CAAT/13 M /AC: RSP00550//OS: Lycopersicon esculentum /GENE: rbcS3B/RE: CAAT/13 M /TF: unknown
  651. Group TF: GBF3 /AC: RSP00682//OS: Arabidopsis thaliana /GENE: Adh/RE: -214 G-box (core) /TF: GBF3
  866. Group TF: GBF /AC: RSP00937//OS: Lycopersicon esculentum /GENE: RbcS-3A/RE: I box /TF: GBF
  999. Group TF: DcMYB1 /AC: RSP01081//OS: Daucus carota /GENE: DcPAL1/RE: box-L3 /TF: DcMYB1
 1034. Group RE: CCAAT box-like motif 2 /AC: RSP01115//OS: Agrobacterium tumefaciens /GENE: ags/RE: CCAAT box-like motif 2 /TF: unknown
 1158. Group TF: GBF1 /AC: RSP01255//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: GBF1 BS2 /TF: GBF1
 1173. Group RE: ACE 1 /AC: RSP01274//OS: Petroselinum crispum /GENE: PcACO-IV/RE: ACE 1 /TF: unknown
 1360. Group RE: CS6 /AC: RSP01499//OS: Triticum aestivum /GENE: H1 (TH315)/RE: CS6 /TF: unknown ||Identical REs AC:  RSP01500