> PLPR0497 ..AC:AB012637.1 ..OS:Nicotiana sylvestris ..GENE:Lhcb1*2 ..PROD:light harvesting chlorophyll a/b-binding protein ..[ -200:  +51]  ..CDS:  +61 ..TSS:201 (+1) # Alternative TSS(s): +4 |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.33   G -  0.16   T -  0.30   C -  0.21

      1  catgggatcg aggacaaatt tggttgggta ccccaagtaa aaatcttgga
     51  aaattgatgg tttagcaatt gccaaatgtg catgaactgc tgcccatatg
    101  aaatcttgaa ccCCAATgag atcagtgata tagatatcac tagataagga
    151  ctctttcatt cttactttcT ATATATAgtg aagctagaat aacttcagct
    201  CATCACAACC AACTTTGACA CCTTAAAACT AGCAATCTCT TACTTTCCTC
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00016   Mean Expected Number 0.007   -strand   -117 : -123   CATGCAC
AC RSP00085   Mean Expected Number 0.003   +strand    -35 :  -20   TTTCTATATATAGTgA
AC RSP00085   Mean Expected Number 0.003   -strand    -20 :  -35   TcACTATATATAGAAA
AC RSP01237   Mean Expected Number 0.009   -strand    -21 :  -30   CaCTATATAT

  Totally       4 motifs of     3 different REs have been found


Description of REs found

   15. Group RE: RY /AC: RSP00016//OS: Glycine max /GENE: beta-conglycinin/RE: RY /TF: unknown
   83. Group TF: AGL3 /AC: RSP00085//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: AGL3-BE /TF: AGL3
 1142. Group RE: -23 Z-BAC+ /AC: RSP01237//OS: Phaseolus vulgaris /GENE: BAC/RE: -23 Z-BAC+ /TF: unknown

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