> PLPR0498 ..AC:AB002807 ..OS:Glycine max ..GENE:nodulin-35 (N-35) ..PROD:uricase II ..[ -200: +51] ..CDS: +65 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.39 G - 0.19 T - 0.25 C - 0.18
1 tgtgtttagg aagagattca acaatcttcg tcctaaccta tttgtagcaa
51 gaaattgaat tgaaaaattt ataacaattt gtttggacaa tgatgtaatg
101 taagggcgca cacagagtta ctgagagggg ggaaagtaaa accggcaaac
151 acggccttgt cctcacacga tacacacaca tataaatagg gcgaaaactc
201 AATAGTTAAC TCAAACATTC TTCAGTTCTA AGAAACCTTA AAAAACAAGT
251 A
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00114 Mean Expected Number 0.003 +strand -45 : -36 CTTGTCcTCA
AC RSP00867 Mean Expected Number 0.001 -strand -91 : -98 TGCGCCCT
AC RSP01458 Mean Expected Number 0.002 +strand -142 : -130 ATTgAAAAATTTA
Totally 3 motifs of 3 different REs have been found
Description of REs found
112. Group RE: B2 /AC: RSP00114//OS: Glycine max /GENE: GmAux28/RE: B2 /TF: unknown
803. Group RE: GCC-box /AC: RSP00867//OS: Nicotiana tabacum /GENE: NiPMT1a/RE: GCC-box /TF: unknown
1328. Group RE: AT-rich ELS /AC: RSP01458//OS: Glycine max /GENE: BiP9/RE: AT-rich ELS /TF: unknown
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