> PLPR0501 ..AC:AB012638.1 ..OS:Nicotiana sylvestris ..GENE:Lhcb1*6 ..PROD:light harvesting chlorophyll a/b-binding protein ..[ -200:  +51]  ..CDS:  +61 ..TSS:201 (+1) # Alternative TSS(s): +5 |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.39   G -  0.12   T -  0.28   C -  0.21

      1  gcaatttaag accacatatt ttggttggac cacagtagta aaaatcttgg
     51  aaaattgatg gattacaaag tgccatgtca acaagaacta atgctaataa
    101  aatcttgaaa cccaatgaaA TTGTagatag agatatcata agataagaac
    151  tctttcaatc aatccctaTA TAAATAttta agcccaacag actacatcac
    201  CACAACTAAC TTCTCTATTA CTTCAGCCAT CAAAAAACAC TTCTTTCTCC
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00227   Mean Expected Number 0.003   +strand    -61 :  -53   AAGATAAGA
AC RSP00313   Mean Expected Number 0.000   -strand   -122 : -132   gACATGGCACT
AC RSP00653   Mean Expected Number 0.002   +strand    +41 :  +51   TTCTtTCTCCT
AC RSP00913   Mean Expected Number 0.003   -strand   -119 : -128   GTTGACATGG
AC RSP01032   Mean Expected Number 0.002   -strand   -177 : -186   CCAAAATATG
AC RSP01114   Mean Expected Number 0.008   -strand   -177 : -183   CCAAAAT

  Totally       6 motifs of     6 different REs have been found


Description of REs found

  220. Group TF: GT-1 /AC: RSP00227//OS: Pisum sativum /GENE: rbcS-3A/RE: BOX III* /TF: GT-1
  299. Group RE: G-box /Group TF: GBF (CG-1) /AC: RSP00313//OS: Pisum sativum /GENE: rbcS-3A/RE: G-box /TF: GBF (CG-1)
  627. Group RE: CT-LB /AC: RSP00653//OS: Spinacia oleracea /GENE: petH/RE: CT-LB /TF: unknown
  844. Group TF: Opaque-2 /AC: RSP00913//OS: Zea mays /GENE: b-32/RE: B1 /TF: Opaque-2
  957. Group TF: FLC /AC: RSP01032//OS: Arabidopsis thaliana /GENE: SOC1/RE: CArG box /TF: FLC
 1033. Group RE: CCAAT box-like motif 1 /AC: RSP01114//OS: Agrobacterium tumefaciens /GENE: ags/RE: CCAAT box-like motif 1 /TF: unknown