> PLPR0507 ..AC:AJ616027.1 ..OS:Arabidopsis thaliana ..GENE:COW1 ..PROD:can of worms 1 protein ..[ -200: +51] ..CDS: +96 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.27 G - 0.10 T - 0.38 C - 0.25
1 tttcaccttg cttcaaatga gcctctccat tatcttcagc ctcccttacc
51 tctccccaaa caatcttctc caatagaggt aaaaataaaa aaataaactc
101 tctcaaattc tctctagctt tctcatcttt ggatcctaaa acacattttg
151 gtcatttaac tcatcttgat tctttagatt catctaatca tttctcatgc
201 GATTTCGATC TAAGCTTTTC TTAAGTGATC TTTACAATGT TGTCTTGGTA
251 G
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP01435 Mean Expected Number 0.007 +strand -148 : -139 TCCCCAAaCA
AC RSP01475 Mean Expected Number 0.001 -strand -50 : -58 CCAAAATGT
Totally 2 motifs of 2 different REs have been found
Description of REs found
1308. Group TF: RNFG2 /AC: RSP01435//OS: Oryza sativa /GENE: RSs1/RE: BoxII /TF: RNFG2
1343. Group RE: GCAA-like motif /AC: RSP01475//OS: Oryza sativa /GENE: GluA-3/RE: GCAA-like motif /TF: unknown
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