> PLPR0508 ..AC:M11317 ..OS:Glycine max ..GENE:Gmhsp17.6-L ..PROD:heat shock protein ..AC [-326:+51] ..AC ..CDS: +114 |Taxon: Dicot |Promoter: TATA
Nucleotide Frequencies: A - 0.36 G - 0.15 T - 0.31 C - 0.18
1 atatatatat atatatatct agaaggttgt agaagactag ctagaacgta
51 cgtattcgtg tggagaagtc ctgaagttta tcgaatcatc taaaactgct
101 aaaatagcaa acaacattat attgtaaACA ATatttttct ggaacataca
151 agagtatcct ttcacttccT TTAAATAcct cgagtgtccc cattgacatc
201 ATCAAACAAG AGAAGAGTTA CAGAATTTCC TGTTTACGAT CTCATTACAA
251 T
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00503 Mean Expected Number 0.002 +strand -164 : -157 CTAGCTAG
AC RSP00503 Mean Expected Number 0.002 -strand -157 : -164 CTAGCTAG
AC RSP01601 Mean Expected Number 0.008 +strand -41 : -34 TTTCACTT
Totally 3 motifs of 2 different REs have been found
Description of REs found
479. Group TF: RITA-1 /AC: RSP00503//OS: Nicotiana tabacum /GENE: Ntltp1/RE: D1 box /TF: RITA-1
1422. Group RE: Inr /AC: RSP01601//OS: Spinacia oleracea /GENE: PsaDb/RE: Inr /TF: unknown
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