> PLPR0515 ..AC:L08425.1 ..OS:Zea mays ..GENE:ER-abp1 ..PROD:auxin-binding protein ..[ -200: +51] ..CDS: +111 ..TSS:201 (+1) |Taxon: Monocot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.25 G - 0.25 T - 0.22 C - 0.27
1 aacaagccct acatatatgc cggttggatt cttgttgcct tatttctgtc
51 caagcaagat tttcgttaac agaggagagc aaaaaaaaaa aaaaaaacag
101 gtcgtccggc ctggcaaggc gaggcttgtc ctgcgtggtg cggcttgtct
151 ctgggccggc tgctcccaca ggctatctga gccgctccat ttgatcggac
201 AGTCGACACC GTCCGAGCGG CGATCAAAAC CACCTTCGAC GACTACGCCG
251 A
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP01013 Mean Expected Number 0.003 -strand -8 : -17 CAAATGGAGc
AC RSP01191 Mean Expected Number 0.006 +strand -35 : -28 CCACAGGC
AC RSP01641 Mean Expected Number 0.003 +strand -58 : -49 gCTTGTCTCT
Totally 3 motifs of 3 different REs have been found
Description of REs found
938. Group TF: GAPF /AC: RSP01013//OS: Arabidopsis thaliana /GENE: GapA/RE: Gap box 1 /TF: GAPF
1102. Group RE: A-box /Group TF: A factor /AC: RSP01191//OS: Nicotiana tabacum /GENE: Adhl/RE: A-box /TF: A factor
1461. Group RE: ARE /AC: RSP01641//OS: Nicotiana tabacum /GENE: P-450/RE: ARE /TF: unknown
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