> PLPR0516 ..AC:X07159 ..OS:Glycine max ..GENE:Gmhsp17.9-D ..PROD:heat shock protein  ..[ -200:  +51]  ..CDS:  +73 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.33   G -  0.12   T -  0.28   C -  0.27

      1  tactagaaag atccgaagac tcagaagctg tccgtaacat aaccgaacct
     51  actggaagtt tcacagcaga caattgcttt ctccagaaac ttccatttcc
    101  aaaacgcgca ctttaagtag ttatcttcag aaacttccat ttctttctcg
    151  aattatctat gtatcccgTA TAAATTgcca cccacccacc ctttttcgac
    201  TACACAGAAA CATTCGCAAA AACAAAATCC CAGTATCAAA ATTCTTCTCT
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00663   Mean Expected Number 0.000   +strand    -36 :  -24   CCCGtATAAATTG
AC RSP00734   Mean Expected Number 0.007   +strand   -101 :  -94   CAAAACGC
AC RSP00860   Mean Expected Number 0.003   -strand    -53 :  -61   AGAAAGAAA
AC RSP01016   Mean Expected Number 0.008   +strand     +6 :  +13   AGAAACAT
AC RSP01030   Mean Expected Number 0.007   +strand   -116 : -109   AGAAACTT
AC RSP01030   Mean Expected Number 0.007   +strand    -72 :  -65   AGAAACTT

  Totally       6 motifs of     5 different REs have been found


Description of REs found

  635. Group RE: SRD motif /AC: RSP00663//OS: Glycine max /GENE: VspB/RE: SRD motif /TF: unknown
  697. Group TF: DET1; CDA-1 /AC: RSP00734//OS: Arabidopsis thaliana /GENE: cab2/RE: CDA-1 BS /TF: DET1; CDA-1
  796. Group TF: BPC1 /AC: RSP00860//OS: Arabidopsis thaliana /GENE: STK/RE: GA-1 /TF: BPC1
  941. Group TF: AEF /AC: RSP01016//OS: Arabidopsis thaliana /GENE: GapA/RE: AE box 1 /TF: AEF
  955. Group TF: AEF /AC: RSP01030//OS: Arabidopsis thaliana /GENE: GapB/RE: AE box 1 /TF: AEF