> PLPR0517 ..AC:M23105.1 ..OS:Arabidopsis thaliana ..GENE:HSP70-1 ..PROD:heat shock protein ..[ -200: +51] ..CDS: +107 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
Nucleotide Frequencies: A - 0.32 G - 0.12 T - 0.29 C - 0.27
1 acaaaccaat caaaatactg aataatgcca acgtgtacaa attagggttt
51 tacctcacaa ccatcgaaca ttctcgaaac attttaaaca gcctggcgcc
101 atagatctaa actctcatcg aCCAATtttt gaccgtccga tggaaactct
151 agcctcaacc caaaactcTA TATAAAgaaa tcttttcctt cgttattgct
201 TACCAAATAC AAATCCCTAG CCGCCTTATT CGTCTTCTTC GTTCTCTAGT
251 T
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00030 Mean Expected Number 0.006 +strand +19 : +25 AGCCGCC
AC RSP00279 Mean Expected Number 0.000 +strand -159 : -151 TTAGGGTTT
AC RSP00369 Mean Expected Number 0.000 -strand -151 : -159 AAACCCTAA
AC RSP01303 Mean Expected Number 0.001 -strand -150 : -159 aAAACCCTAA
Totally 4 motifs of 4 different REs have been found
Description of REs found
29. Group TF: EREBP /AC: RSP00030//OS: Nicotiana sylvestris /GENE: OLP/RE: ERRE /TF: EREBP ||Identical REs AC: RSP00082 RSP01344 RSP01523 RSP01764 RSP01775
270. Group RE: inverted Telo box /AC: RSP00279//OS: Arabidopsis thaliana /GENE: A-p40/RE: inverted Telo box /TF: unknown ||Identical REs AC: RSP00448
354. Group RE: telo-box /AC: RSP00369//OS: Arabidopsis thaliana /GENE: eEF1AA1/RE: telo-box /TF: unknown
1196. Group RE: Telo box /AC: RSP01303//OS: Arabidopsis thaliana /GENE: A1 EF-1alpha/RE: Telo box /TF: unknown
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