> PLPR0521 ..AC:X99214.1 ..OS:Lycopersicon esculentum ..GENE:TPSI1 ..PROD:phosphate starvation induced gene product ..[ -200: +51] ..CDS: +95 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
Nucleotide Frequencies: A - 0.33 G - 0.13 T - 0.35 C - 0.19
1 ttacttatta catatagatt atatgccttt tttttttgaa aaaaaagaaa
51 acgaaaatat cataaactca aaattctaaa tctgcttcgt tcgccaatat
101 aaaatataaa gtattcttat tttttATTGT catcatgatg taggacaaaa
151 gaaccaagtg gccactctTA TAAACActaa gccatgcctt gtataacaaa
201 CCCTCTCTCC CCTTTCATGT GAGGCTTCCT TTGCATGGTT TTACTAGTGG
251 G
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00153 Mean Expected Number 0.001 +strand -47 : -38 CCAaGTGGCC
AC RSP00522 Mean Expected Number 0.004 -strand -40 : -46 CCACTTG
AC RSP00885 Mean Expected Number 0.000 +strand -6 : +7 AACAAACCCTCTC
Totally 3 motifs of 3 different REs have been found
Description of REs found
149. Group RE: Box II /AC: RSP00153//OS: Petroselinum crispum /GENE: CHS/RE: Box II /TF: CPRF-1; CPRF-2; CPRF-3; ||Identical REs AC: RSP00154
498. Group TF: DPBF-1; DPBF-2 /AC: RSP00522//OS: Daucus carota /GENE: Dc3/RE: E2-core /TF: DPBF-1; DPBF-2
818. Group RE: AACA motif /AC: RSP00885//OS: Zea mays /GENE: gamma-27kDa zein/RE: AACA motif /TF: unknown
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