> PLPR0525 ..AC:AB007911.1 ..OS:Pisum sativum ..GENE:PRA2 ..PROD:light-responsible GTP-binding protein ..[ -200: +51] ..CDS: +197 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.43 G - 0.08 T - 0.30 C - 0.19
1 taaaccaaac aaacttagaa tattttgtaa ttatagcaca attttcaaaa
51 atatcctagt cttcaaccac tcaataattc acaatttcca aatcccttgc
101 aaaacatcac aacctctaga aactttgatt aataatctaa taaaaGCAAT
151 aatatgatat ctaaacaata tcaccatata tgttatgata taatatgatg
201 CAGCAATACA CTTAATTTGG TAAAGCATTA AAGCGAGACA ACTCTATTAA
251 C
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00450 Mean Expected Number 0.004 +strand -156 : -145 TCAAAAATATcC
AC RSP00749 Mean Expected Number 0.003 +strand -179 : -168 ATTTTGTAATTA
AC RSP01032 Mean Expected Number 0.002 -strand +20 : +11 CCAAATTAAG
Totally 3 motifs of 3 different REs have been found
Description of REs found
429. Group RE: AIV /AC: RSP00450//OS: Phaseolus vulgaris /GENE: CHS/RE: AIV /TF: unknown
711. Group TF: GT-1 /AC: RSP00749//OS: Catharanthus roseus /GENE: STR/RE: BN /TF: GT-1
957. Group TF: FLC /AC: RSP01032//OS: Arabidopsis thaliana /GENE: SOC1/RE: CArG box /TF: FLC
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