> PLPR0526 ..AC:X02727 ..OS:Glycine max ..GENE:N-24 ..PROD:nodulin-24 ..[ -200: +51] ..CDS: +45 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
Nucleotide Frequencies: A - 0.34 G - 0.14 T - 0.37 C - 0.16
1 caaagaaaaa gataactatt tagagtatta ttttaacact tttggtgctc
51 ttacataata ataaatcagt tagtaacttt tgaaaattct gaattaatat
101 gttacggcgc caggtaagaa agaggagttt ccctatttct cctactccaa
151 ctcctttata tagagTATAT ATCccacaaa ttttctcatc ttttgttact
201 AAACAAACTC GATCTGTTGT AATTTATTTA GTACGTATTG AAAAATGGGT
251 T
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00247 Mean Expected Number 0.001 +strand -92 : -83 GCCAgGTAAG
AC RSP00270 Mean Expected Number 0.003 +strand -166 : -156 aACACTTTTGG
AC RSP00694 Mean Expected Number 0.000 +strand +2 : +14 AACAAACTCGATC
Totally 3 motifs of 3 different REs have been found
Description of REs found
240. Group TF: REB /AC: RSP00247//OS: Oryza sativa /GENE: alpha-globulin/RE: REB1 /TF: REB ||Identical REs AC: RSP00738
262. Group TF: OBP1 /AC: RSP00270//OS: Arabidopsis thaliana /GENE: GST6/RE: OBP1 BS /TF: OBP1
660. Group RE: AACAA motif /AC: RSP00694//OS: Oryza sativa /GENE: Gt1/RE: AACAA motif /TF: unknown ||Identical REs AC: RSP01062
Download This Page
Download Promoter Sequence in FASTA Format