> PLPR0530 ..AC:L28828.1 ..OS:Arabidopsis thaliana ..GENE:rps11 ..PROD:ribosomal protein S11 ..[ -200:  +51]  ..CDS:  +81 ..TSS:201 (+1) # Alternative TSS(s): +2 +5 +6 +9 +10 |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.32   G -  0.15   T -  0.31   C -  0.21

      1  tattgttcca aaaacaaaaa gtaaaacaaa acacaccctt accaaaatta
     51  tgtcaagtca aagcatcctc gttttaggga ttttctatac ttgggcctaa
    101  atactaaggc ccgtaattaa aggcccaata acgtttgtgg tATTGTacaa
    151  ttttcatgta gaaaatgtct TATATAAAga ggtcttgcaa attagggttt
    201  TCATTTCAGT AATCGCTGCC GCACTATCGT CTCCTACCTC CTTTGCCTAC
    251  A

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00021   Mean Expected Number 0.003   +strand   -185 : -174   AAAAAGTAAAAc
AC RSP00260   Mean Expected Number 0.009   +strand   -128 : -122   TTTAGGG
AC RSP00279   Mean Expected Number 0.001   +strand     -9 :   -1   TTAGGGTTT
AC RSP00369   Mean Expected Number 0.001   -strand     -1 :   -9   AAACCCTAA
AC RSP01303   Mean Expected Number 0.002   -strand     +1 :   -9   aAAACCCTAA

  Totally       5 motifs of     5 different REs have been found


Description of REs found

   20. Group TF: GT-1 /AC: RSP00021//OS: Catharantus roseus /GENE: TDC/RE: GT-1#Box7 /TF: GT-1
  253. Group RE: RTBP1 BS /AC: RSP00260//OS: Oryza sativa /GENE: Synthetic OLIGO/RE: RTBP1 BS /TF: unknown
  270. Group RE: inverted Telo box /AC: RSP00279//OS: Arabidopsis thaliana /GENE: A-p40/RE: inverted Telo box /TF: unknown ||Identical REs AC:  RSP00448
  354. Group RE: telo-box /AC: RSP00369//OS: Arabidopsis thaliana /GENE: eEF1AA1/RE: telo-box /TF: unknown
 1196. Group RE: Telo box /AC: RSP01303//OS: Arabidopsis thaliana /GENE: A1 EF-1alpha/RE: Telo box /TF: unknown

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