> PLPR0535 ..AC:U81996.1 ..OS:Lycopersicon esculentum ..GENE:le16 ..PROD:non specific lipid transfer protein protein ..[ -200: +51] ..CDS: +59 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
Nucleotide Frequencies: A - 0.34 G - 0.10 T - 0.36 C - 0.20
1 caggaaaagt agtattggga caatttgtgg attgggcctt aaatcgtgta
51 tagcgtggtt caataaaaat tagtcacgta acaaacgaaa tttgacttta
101 tactcatttc atttaactct taactcccaa ctaattctct catttttaat
151 tccactaatt tcctctcTAT AAATActcac tagcttttac acctaacaca
201 CAAAACAAAT ACAATTGTAC TACTATATCT ATAATCTTTA CTCAATTTTT
251 T
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00863 Mean Expected Number 0.002 -strand -33 : -41 AGAGAGGAA
AC RSP01301 Mean Expected Number 0.002 +strand -34 : -25 CTATAAATAC
Totally 2 motifs of 2 different REs have been found
Description of REs found
799. Group TF: BPC1 /AC: RSP00863//OS: Arabidopsis thaliana /GENE: STK/RE: GA-4 /TF: BPC1
1195. Group RE: TATA box /Group TF: TBF /AC: RSP01301//OS: Triticum aestivum /GENE: Amy2/54/RE: TATA box /TF: TBF ||Identical REs AC: RSP01302
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