> PLPR0537 ..AC:M76546.1 ..OS:Helianthus annuus ..GENE:HaHX3 ..PROD:hydroxyproline-rich protein ..[ -200: +51] ..CDS: +47 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
Nucleotide Frequencies: A - 0.38 G - 0.15 T - 0.35 C - 0.12
1 aaaactataa taatgcaaac ggtaattatt ccaggatgat aataggacac
51 cttgggatgc attgatagtc tttagtttac attcatataa cttattctat
101 tgtagttggt agaataattt tcaactaaaa tttaatttaa ttactttcat
151 tctttaaaaT ATAATAAaat gtgatctctt ttgggtatat aagggatgat
201 ATGTAGCCTC TAAAAACACA ACTTATAGTA GAAATGGGAA ACCAATATGA
251 A
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00914 Mean Expected Number 0.004 +strand -6 : +4 GATGATATGT
AC RSP01762 Mean Expected Number 0.009 -strand -146 : -151 CCAAGG
Totally 2 motifs of 2 different REs have been found
Description of REs found
845. Group RE: B2 /Group TF: Opaque-2 /AC: RSP00914//OS: Zea mays /GENE: b-32/RE: B2 /TF: Opaque-2
1567. Group TF: NSP1 /AC: RSP01762//OS: Arabidopsis thaliana /GENE: ANAC13 (At1g32870)/RE: UVBox (ANAC13) /TF: NSP1
Download This Page
Download Promoter Sequence in FASTA Format