> PLPR0540 ..AC:M38053.1 ..OS:Gossypium hirsutum ..GENE:LEA2 ..PROD:embryogensis abundant protein gene ..[ -200:  +51]  ..CDS: +100 ..TSS:201 (+1) # Alternative TSS(s): +2 |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.22   G -  0.18   T -  0.34   C -  0.27

      1  gcattggact cgtgtcaaac gactttgaat ccaaaataca tttttgaagg
     51  actaagcacc tgcgtgtcat tgccatatgg cttcattgct cctccttcgc
    101  cgcgtttatt cgattacgtg tcctgccttc cttgatcggc acccttgctc
    151  atccttcata ccttgccttT ATATAAAgca ccaactctac gttttgtatg
    201  CACAATTACG TGAATTCACC TGGTGTAAGC TTGTCTCAGT AGTTTCCAAG
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00070   Mean Expected Number 0.005   +strand    -86 :  -79   TACGTGTC
AC RSP00142   Mean Expected Number 0.007   +strand   -103 :  -97   CGCCGCG
AC RSP00143   Mean Expected Number 0.004   +strand   -194 : -185   GACtCGTGTC
AC RSP01261   Mean Expected Number 0.006   +strand    -87 :  -80   TTACGTGT

  Totally       4 motifs of     4 different REs have been found


Description of REs found

   69. Group TF: TRAB1 /AC: RSP00070//OS: Oryza sativa /GENE: Osem/RE: ABRE motif A /TF: TRAB1
  138. Group RE: GC-rich motif /AC: RSP00142//OS: Phaseolus vulgaris /GENE: beta-phaseolin, or phas/RE: GC-rich motif /TF: unknown
  139. Group TF: TRAB1 /AC: RSP00143//OS: Oryza sativa /GENE: Osem/RE: CE3 /TF: TRAB1
 1163. Group TF: GBF1 /AC: RSP01261//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: GBF1 BS8 /TF: GBF1