> PLPR0556 ..AC:AB112028 ..OS:Nicotiana glutinosa ..GENE:ngr1 ..PROD:ribonuclease NW ..[ -200: +51] ..CDS: +383 |Taxon: Dicot |Promoter: TATA
Nucleotide Frequencies: A - 0.40 G - 0.08 T - 0.33 C - 0.18
1 cataatatat tattaaccca aaatcatatg cttaaagaat ataccaaaat
51 caataattat catcttctca ttgtcaacat cagtagcact aatatggaat
101 cagATTGTaa tatgaagctc ctcaaattca cacttaaaat tagtctgttc
151 acatctttat attttttcTA TAAATAaaca agccaaaaat cagtatcaat
201 ACACTCTTTT AAAGTTCACA AAAGAAATTT TAATGGCTTC AGATTCAGCC
251 A
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP01129 Mean Expected Number 0.009 +strand -20 : -7 AGC-- +7 bp --CAGT
AC RSP01201 Mean Expected Number 0.001 +strand -88 : -81 TGAAGCTC
Totally 2 motifs of 2 different REs have been found
Description of REs found
1048. Group TF: ZPT2-2 /AC: RSP01129//OS: Petunia hybrida /GENE: Synthetic OLIGO/RE: ZPT2-2 BS 3 /TF: ZPT2-2
1112. Group TF: NIT2 /AC: RSP01201//OS: Chlorella vulgaris /GENE: NR/RE: NIT2 BS II /TF: NIT2
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