> PLPR0558 ..AC:AB101032 ..OS:Solanum melongena  ..GENE:SmCP ..PROD:cysteine proteinase ..[ -200:  +51]  ..CDS: +407 ..TSS:201 (+1) ... |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.39   G -  0.13   T -  0.31   C -  0.17

      1  aaaatgaata gattataata aaataataaa aatacattta ttaaatgcat
     51  atttaatctg atttcaaaaa aaaattgtga aatatagcta ccacacgtat
    101  catgaggcgA CAATtacacg tgtcagcatc acaacggcta actcacatac
    151  ctaaccatgt tctcggagcc aatatatact cgagtagcta aagaggagag
    201  GAGAAAATAT CCGCATTCAT TTCTTCTTCA TTCTTCTTTT TATTATTATT
    251  T

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00340   Mean Expected Number 0.002   +strand    -86 :  -77   TaCACGTGTC
AC RSP00524   Mean Expected Number 0.005   +strand    -85 :  -79   ACACGTG
AC RSP00524   Mean Expected Number 0.004   -strand    -78 :  -84   ACACGTG
AC RSP01035   Mean Expected Number 0.004   +strand    -83 :  -77   ACGTGTC
AC RSP01256   Mean Expected Number 0.002   +strand    -85 :  -78   ACACGTGT
AC RSP01256   Mean Expected Number 0.002   -strand    -78 :  -85   ACACGTGT
AC RSP01288   Mean Expected Number 0.005   -strand   -101 : -108   ATACGTGT

  Totally       7 motifs of     5 different REs have been found


Description of REs found

  325. Group TF: SGBF-1; SGBF-2 /AC: RSP00340//OS: Glycine max /GENE: GmAux28/RE: B1-core /TF: SGBF-1; SGBF-2 ||Identical REs AC:  RSP00965
  500. Group TF: DPBF-1; DPBF-2 /AC: RSP00524//OS: Daucus carota /GENE: Dc3/RE: E4-core /TF: DPBF-1; DPBF-2
  960. Group TF: ABI3; ABI5; AREB1 /AC: RSP01035//OS: Arabidopsis thaliana /GENE: RD29B/RE: ABRE 3 /TF: ABI3; ABI5; AREB1
 1159. Group TF: GBF1 /AC: RSP01256//OS: Arabidopsis thaliana /GENE: Synthetic OLIGO/RE: GBF1 BS3 /TF: GBF1
 1185. Group RE: Z-DNA-motif /AC: RSP01288//OS: Arabidopsis thaliana /GENE: cab1/RE: Z-DNA-motif /TF: unknown

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