> PLPR0564 ..AC:AB009385 ..OS:Pyrus serotina ..GENE:S4-RNase ..PROD:S4-RNase..[ -200:  +51]  ..CDS:  +93 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA
  Nucleotide Frequencies:  A -  0.35   G -  0.16   T -  0.32   C -  0.17

      1  aactaagggc attgcacatg actagtttga atagaaataa tggagcaaaa
     51  tttgctataa atttattgaa catgtgatca aatatacgtg atcatggatg
    101  tTCAATtaaa ggtatttggt ggacccctta tttatgcatg catgtacgca
    151  tatgcctaca actagtacTA TAAATAtaag agcttaattg atctccaatt
    201  GATCCGCACC ACCACCTATA CTACTTGAAA AGTTTTAATC GATCTAATTA
    251  G

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00108   Mean Expected Number 0.002   +strand    -64 :  -57   CATGCATG
AC RSP00108   Mean Expected Number 0.002   -strand    -57 :  -64   CATGCATG
AC RSP00350   Mean Expected Number 0.001   -strand    -53 :  -63   CGTaCATGCAT
AC RSP01074   Mean Expected Number 0.001   +strand    -65 :  -56   GCATGCATGt
AC RSP01074   Mean Expected Number 0.001   -strand    -56 :  -65   ACATGCATGC
AC RSP01296   Mean Expected Number 0.007   +strand    -33 :  -25   CTATAAATA
AC RSP01470   Mean Expected Number 0.008   +strand   -109 : -100   TCATGgATGT
AC RSP01470   Mean Expected Number 0.008   +strand    -65 :  -56   gCATGCATGT

  Totally       8 motifs of     5 different REs have been found


Description of REs found

  106. Group RE: RY4 /AC: RSP00108//OS: Phaseolus vulgaris /GENE: beta-phaseolin, or phas/RE: RY4 /TF: unknown ||Identical REs AC:  RSP01169  RSP01452
  335. Group RE: VP1 RE /AC: RSP00350//OS: Zea mays /GENE: C1/RE: VP1 RE /TF: unknown
  992. Group TF: PvAlf /AC: RSP01074//OS: Arachis hypogea; Phaseolus vulgaris /GENE: Em/RE: Sph /TF: PvAlf
 1192. Group RE: TATA box /Group TF: TBF /AC: RSP01296//OS: Avena fatua /GENE: Amy2/D/RE: TATA box /TF: TBF
 1340. Group TF: Opaque-2 (O2) /AC: RSP01470//OS: Zea mays /GENE: alpha-22kDa zein/RE: Z2 /TF: Opaque-2 (O2)