> PLPR0566 ..AC:X61915 ..OS:Pinus thunbergii ..GENE:LHC cab-6 ..PROD:light-harvesting complex chlorophyll a/b-binding protein ..[ -200:  +51]  ..CDS:  +69 |Taxon: Conifers |Promoter: TATA
  Nucleotide Frequencies:  A -  0.29   G -  0.23   T -  0.27   C -  0.20

      1  gaaactagaa gattcttgtg agcccgaagt cctatctgga caagatctcg
     51  aaattggaat cgatggctaa agattcaagg aaatatggcc ttgagatgtg
    101  gatatttggg gaaCCAATaa gaaggtaaga aggctggcgt tcggataagg
    151  cacgacagca ccgtccgcTA TATATGccct tcttacctta tgtatctttc
    201  AGAATAACAG CTCATCACTC GCATTACCTG ACTTTGGTCT GAGCATTTTT
    251  C

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00057   Mean Expected Number 0.007   -strand    -99 : -108   TCCACaTCTC
AC RSP00379   Mean Expected Number 0.003   +strand    -59 :  -50   CGGATAaGGC
AC RSP00574   Mean Expected Number 0.007   +strand     -1 :   +7   CAGAATAA
AC RSP01031   Mean Expected Number 0.006   -strand   -185 : -192   AGAATCTT
AC RSP01237   Mean Expected Number 0.004   +strand    -35 :  -26   CgCTATATAT

  Totally       5 motifs of     5 different REs have been found


Description of REs found

   56. Group TF: ABF /AC: RSP00057//OS: Zea mays /GENE: rab28/RE: ABRE B /TF: ABF
  364. Group RE: LS7 /AC: RSP00379//OS: Lemna gibba /GENE: Lhcb2 (cabAB19)/RE: LS7 /TF: unknown
  550. Group RE: AT-rich K /AC: RSP00574//OS: Lycopersicon esculentum /GENE: rbcS1/RE: AT-rich K /TF: unknown
  956. Group TF: AEF /AC: RSP01031//OS: Arabidopsis thaliana /GENE: GapB/RE: AE box 2 /TF: AEF
 1142. Group RE: -23 Z-BAC+ /AC: RSP01237//OS: Phaseolus vulgaris /GENE: BAC/RE: -23 Z-BAC+ /TF: unknown