> PLPR0569 ..AC:X66135 ..OS:Spinacia oleracea ..GENE:rps1 ..ACPROD:chloroplastic ribosomal protein S1 {+350:+50} ..AC ..CDS: +0 |Taxon: Dicot |Promoter: TATA-less
Nucleotide Frequencies: A - 0.33 G - 0.11 T - 0.24 C - 0.32
1 ttggaccatt gccgcaacaa gtctattact cttttcaagc aagcaatcgg
51 accctcttac acaacacaca ccactacacc atcagccatc aaccaaatct
101 tgtgcatatt gttgggccaa CCAATctcaa gtttaacaac ctctctctac
151 cgtatcatca aaccaacctc tctctctcca ctctactcat ccccttatct
201 GCGTATCTCA ACAAACAACA ACATAGGAAG AAGATCAAAG AGTAGCAACA
251 A
RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):
AC RSP00864 Mean Expected Number 0.002 -strand -24 : -32 AGAGAGAGA
AC RSP00865 Mean Expected Number 0.003 -strand -22 : -30 GGAGAGAGA
Totally 2 motifs of 2 different REs have been found
Description of REs found
800. Group TF: BPC1 /AC: RSP00864//OS: Arabidopsis thaliana /GENE: STK/RE: GA-5 /TF: BPC1
801. Group TF: BPC1 /AC: RSP00865//OS: Arabidopsis thaliana /GENE: STK/RE: GA-6 /TF: BPC1
Download This Page
Download Promoter Sequence in FASTA Format