> PLPR0574 ..AC:X59139 ..OS:Lycopersicon esculentum  ..GENE:ACC2 ..PROD:1-aminocyclopropane-1-carboxylic acid synthase 2 ..[ -200:  +51]  ..CDS: +153 ..TSS:201 (+1) |Taxon: Dicot |Promoter: TATA-less
  Nucleotide Frequencies:  A -  0.33   G -  0.08   T -  0.41   C -  0.18

      1  gaagtaagaa tcgtagatct tcttttaatg cgtactttta ttttccaaga
     51  tttgaacaat aaaatagact tttctatttt tattttctga tgtaattctt
    101  atatacgtta gtcgacatgt tctcattaca tacttcagtc tttcccctta
    151  tatatatccc tcacattcct taattctctt acaccataac acaactacaa
    201  CAAACACATA ATACTTTTAA TACAATTAGT TATTTATTAG AAGTATTTAA
    251  A

  RE motifs found (positions are given in relation to TSS at 201; Mismatches - in lower case):

AC RSP00203   Mean Expected Number 0.003   +strand    -99 :  -90   TATACGTtAG
AC RSP00747   Mean Expected Number 0.002   -strand   -109 : -120   CATCAGaAAATA

  Totally       2 motifs of     2 different REs have been found


Description of REs found

  196. Group TF: ABI5 /AC: RSP00203//OS: Arabidopsis thaliana /GENE: AtEm6/RE: ABRE/6.1 /TF: ABI5
  709. Group TF: GT-1 /AC: RSP00747//OS: Nicotiana plumbaginifolia /GENE: Cab-E/RE: box 7 /TF: GT-1

Download This Page
Download Promoter Sequence in FASTA Format