Services Test Online


BestPal helix - Calculates best palindrome for given rna sequence with restrictions

Example: Search for RNA secondary structure (Homo sapiens GTF2H4), run Java viewer, generate postscript

Searching best "linear" rna secondary structure in Homo sapiens general transcription factor IIH, polypeptide 4, 52kDa (GTF2H4), mRNA.

Paste nucleotide sequence here:

Alternatively, load a local file with sequence:

Local file name:

Minimal spiral size:  
Maximum distance: 

Graphical output of Computed structure is provided in Java viewer or postscript:
Run Java viewer (Java viewer help)
Generate Postscript file

Note. To run applet viewer you need to include in the list of your browser (see instruction).

[Help] [Program's page]
[Example: Search for RNA secondary structure (Homo sapiens GTF2H4)]
[Example: Search for RNA secondary structure (fragment of Mus musculus Qtrtd1)]

Return to page with other programs of group: RNA structure

Your use of Softberry programs signifies that you accept Terms of Use

Last modification date: 26 Mar 2015