|
The programs usage in Scientific publications FMAP - instantly maps your sequence to human genome draft - click this link to use FMAP. [Example] SCAN2 - program for aligning two multimegabyte-size nucleotid sequences [Help] [Example] SCAN2a - program for aligning two multimegabyte-size aminoacid sequences [Help] [Example] DBSCAN - database homology search program similar to BLAST, but handling multimegabyte-size sequences. [Example] EST_map - Mapping your mRNA/EST to Chromosome sequence of Human genome [Help] [Example] PROT_map - mapping of a set of proteins on genome [Help] [Example] SMAP - mapping oligonucleotides to genome [Help] [Example] Genomes Match - comparison of 2 genomic or chromosomes (with viewer) [Example] Genomes Match 2 - comparison of 2 genomic or chromosomes (without viewer) [Example] Genome Match - Java Alignment browser. [Help] Constructing and Visualizing synteny for assembled genomes. You can also BLAST search of your sequence through human/mouse/Drosophila genes/proteins predicted by Softberry from genome sequences using complex script FGENESH++ that combines FGENESH, FGENESH+ and EST_MAP programs. BLAST - Comparing your nucleotide sequence with Fgenesh++ set of mRNA/ORF To view human genome in our GenomeSequence Explorer, click here - you can also map your sequence by FMAP in that graphical interface. To view mouse genome, click here. |