BESTORF

Finding potential coding fragment EST/mRNA

Example

Paste nucleotide sequence here:
>>HUMSFRS_8213_DNA_14-FEB-1996 cgagccctgggcgctgcttgctaaagagccgagcacgcgggtctgtcatc atgtcgcgttacgggcggtacggaggagaaaccaaggtgtatgttggtaa cctgggaactggcgctggcaaaggagagttagaaagggctttcagttatt atggtcctttaagaactgtatggattgcgagaaatcctccaggatttgcc tttgtggaattcgaagatcctagagatgcagaagatgcagtacgaggact ggatggaaaggtgatttgtggctcccgagtgagggttgaactatcgacag gcatgcctcggagatcacgttttgatagaccacctgcccgacgtcccttt gatccaaatgatagatgctatgagtgtggcgaaaagggacattatgctta tgattgtcatcgttacagccggcgaagaagaagcaggtcacggtctagat cacattctcgatccagaggaaggcgatactctcgctcacgcagcaggagc aggggacgaaggtcaaggtcagcatctcctcgacgatcaagatctatctc tcttcgtagatcaagatcagcttcactcagaagatctaggtctggttcta taaaaggatcgaggtatttccaatccccgtcgaggtcaagatcaagatcc aggtctatttcacgaccaagaagcagccgatcaaagtccagatctccatc tccaaaaagaagtcgttccccatcaggaagtcctcgcagaagtgcaagtc ctgaaagaatggactgaagctctcaagttcaccctttagggaaaagttat tttgtttacattattat

Alternatively, load a local file with sequence in Fasta format:

Local file name:

Select organism specific gene-finding parameters :

Total 506 genome-specific parameters are available for genefinders of FGENESH suite

Return to page with other programs of group: Gene finding

Most gene finding parameters presented here were trained by Softberry for its own use and distribution, using proprietary and publicly available data. Some of the parameters were created for our academic customers, including Broad Institute/MIT, Washington University, University of Minnesota and The Institute for Genomic Research (TIGR).

Your use of Softberry programs signifies that you accept Terms of Use

Last modification date: 12 Dec 2013

Services Test Online

BESTORF

Example