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Comparsion of genomic and protein sequences

You can BLAST search of your sequence through human/mouse/rat genes/proteins predicted by Softberry from genome sequences using complex script FGENESH++ that combines FGENESH, FGENESH+ and ESTS_MAP programs.

To view human genome in our Genome Explorer, click here - you can also map your sequence by FMAP in that graphical interface. To view mouse genome, click here.

BLAST (NCBI program) / Comparing your protein sequence with Fgenesh++ set of proteins

Paste your protein sequence in here:

Alternatively, load a local file with sequence in Fasta format:
Local file name:

Choose organism:

   Drosoph AA
   Ecoli AA
   PDB AA
   Swissprot AA

Advanced options [see example of value in (..)]:

-e
Put here other options, if any.

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[Example]

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Last modification date: 24 Jul 2007