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FGENESH-2

Reference: Solovyev V.V. (2007) Statistical approaches in Eukaryotic gene prediction. In Handbook of Statistical genetics (eds. Balding D., Cannings C., Bishop M.), Wiley-Interscience; 3d edition, 1616 p.

HMM gene prediction using two genomic sequences of close organisms (as Human and Mouse)

Paste nucleotide sequence here:

Alternatively, load a local file with sequence in Fasta format:

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Paste second sequence here:

Alternatively, load a local file with sequence in Fasta format:

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Select organism specific gene-finding parameters :

Total 469 genome-specific parameters are available for genefinders of FGENESH suite

Write % of protein similarity you expect:

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Most gene finding parameters presented here were trained by Softberry for its own use and distribution, using proprietary and publicly available data. Some of the parameters were created for our academic customers, including Broad Institute/MIT, Washington University, University of Minnesota and The Institute for Genomic Research (TIGR).


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Last modification date: 12 Dec 2013