Reference: Solovyev V.V. (2007) Statistical approaches in Eukaryotic gene prediction. In Handbook of Statistical genetics (eds. Balding D., Cannings C., Bishop M.), Wiley-Interscience; 3d edition, 1616 p.
HMM plus similar cDNA-based gene structure prediction (multiple genes, both chains)
Return to page with other programs of group: Gene finding with similarity
Most gene finding parameters presented here were trained by Softberry for its own use and distribution, using proprietary and publicly available data. Some of the parameters were created for our academic customers, including Broad Institute/MIT, Washington University, University of Minnesota and The Institute for Genomic Research (TIGR).
Last modification date: 12 Dec 2013