Cloud computing services

We make available to clients our own and public pipelines in AWS cloud. Examples of Softberry pipelines that can be run in AWS cloud:

  • ReadsClean pipeline: Error correction in NGS sequencing reads.
  • Bacterial genome annotation: identification of genes, proteins and operons, functional annotation of genes.
  • VirusPoints: pipeline for accurate identification of viruses and their integration sites in host genomes using NGS Data.
  • ReadsMap: pipeline for accurate mapping of genomic or RNA-Seq reads to genome sequences; SNP and splice site identification.
  • Identification of alternative splicing isoforms of genes using RNA-seq reads.
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